Caiman HDF5 ImporterΒΆ

You can import HDF5 files containing CNMF results that were produced externally by Caiman. The ROIs produced by CNMF, 3D-CNMF or CNMFE will be imported into the current work environment and placed onto the image that is currently open.


You can also use this module through the viewer console, or in the Script Editor instead of clicking buttons.


1# get the module, hide the GUI
2caiman_importer = get_module('caiman_importer', hide=True)
4# import the file